rs259327075 SNP Detail

Summary

• ID
  rs259327075
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:23772378 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATCCTGTGA GCCTGTGATC
  CTGTGAGCCT GTGATCCTGT GAGCCTGTGA TCCTGTGAGC CTGTGAGCCT GTGAGCCTGT
  GATCCTGTGA GCCTGTGATC CTGTGAGCCT GTGATCCTGT GAGCCTGTGA TCCTGTGAGC
  CTGTGTCAGA GCACCTGTGA TCCTGTGAGC CTGTGAGCCT GTGAGCCTGT GATCCTGTGA
  G
  CCTGTGATCC TGTGATCCTG TGAGCCTGTG ATCCTGTGAG CCTGTGATCC TGTGAGCCTG
  TGAGCCTGTG AGCCTGTGAT CCTGTGAGCC TGTGATCCTG TGAGCCTGTG ATCCTGTGAG
  CCTGTGAGCC TGTGAGCCTG TGTCAGAGCA CCTGTGATCC TGTGAGCCTG TGAGCCTGTG
  AGCCTGTGAG TGTCAGAGCA                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57L/J	C58/J	CAST/EiJ	FVB/NJ	I/LnJ	KK/HlJ	LG/J	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J
ss370774557	MGP_WTSI_7_24857972	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57L/J	C58/J	CAST/EiJ	FVB/NJ	I/LnJ	KK/HlJ	LG/J	NON/ShiLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	ST/bJ	SWR/J
rs259327075					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss370774557	MGP_WTSI_7_24857972	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:23772378 () rs orientation: forward

Symbol	Name	Function Class
Gm36694	predicted gene, 36694	within coordinates
Gm44943	predicted gene 44943	962 bp upstream