rs259358464 SNP Detail

Summary

• ID
  rs259358464
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34309954 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCTTGCTTC TTCTTCTCTT
  CCATTCAGAC ATATCTTCCA ATTCAGAAGA TTGCAGAATT GTTTCTAAAC ACAATACAGA
  ATATACATAT ATAGAAGATT ATTTAAGAAA TAACTTTACA CACACACACA CACACACACA
  CACCCCACAG ATACTTTTCT CAGAATACCA ACTCACCATT ATTGCTTTAT TTTTCTTTCT
  Y
  GTGTGTGAGG AAGGAGGATG CTAATATGTA TTACTTAATT TTAAACTGTG TTTTGGTCAG
  GAACCCTGAT GGTCACCTGT AAGGGTGACC AACAGCAAAC AAATGTTCTT ATCATATTTG
  TGACAAGATG CCTAGTAGAC CCTCCCAGAG TTCACTTGGA TGTCTCAGTA TAGAACTTGG
  GGAAATTCTG GTCTACTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320701295	CHEV_3_34154727	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259358464					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34309954 () rs orientation: forward

Symbol	Name	Function Class
Gm52623	predicted gene, 52623	within coordinates