rs259360029 SNP Detail

Summary

• ID
  rs259360029
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:116992659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCCAATTA GACAAAAGTG
  TATATGCCAA CTATGAAATA AAGTCAAAAT CATAAACCAC AGACCAGTTC CATTCTCTCT
  CTCTCTCCTC TGCAGAATCC CAAGTTACAC TGCCAGAGAG AGGCGGCTTA GCCCTGTGTG
  ACCCTAGCTG TGCGACCAGT ATGTGCAGGG CAAACTTCTC TGGCCAGTTT CTTTTATTTT
  W
  AAATCACATT TATTTAGCTT GTTGCTGGAA GTAGGCATTT TGCCCCGCAG TGCACATGAA
  GAGACCAAAG GACAATTTGA GAGAGAGTTA GTATCTCTTC CACTCACGAC GTAGGGCCCA
  GGGATAGGGC TTAGATCTTC CGTCTTGACA TCAGGAACCC TTACCACTGA GCCATCTTAC
  CAGCTGGTGG CCTGTTTCTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323494373	CHEV_10_116593810	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259360029					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:116992659 () rs orientation: forward

Symbol	Name	Function Class
Gm53635	predicted gene, 53635	475 bp upstream