rs259364026 SNP Detail

Summary

• ID
  rs259364026
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28222738 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGAGTCC TCGAGGCCCC
  CGCAAAGCAT CAGGGCAGTT AATGTTCAGC ACAGAAGACC CCTTGCCTCC AGGGCTCGCA
  AGGGAAGGGA CACCAGCACC AAAGTGAATA AAATGCACTG CTGGGAATTA CCTGCCATGC
  TGGGAGGCAG AGCGGGAGCT TGGGTGTGGG GAGAGGGAGA GACAGCCCAC CTCCCCTGTG
  Y
  AGATCCTCTG TCTCCTGGAA GGACTGACTG TGGGAGGAGA AGGAGGCTCT GTTCTCTGCT
  CCTCCAAGAG CTCTGGGCAG GATTTGGATG CCTGCTTCCT GGGGACTTGC CTGCCTCTCT
  CAAACCTGGC AAGGCTTCCC TTCCCCTTCA AAGCCCAGGT TAGAGTCCAC CACCCCCAGA
  AGCTCCCAAC TCATCCCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325351166	CHEV_17_28140709	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259364026					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28222738 () rs orientation: forward

Symbol	Name	Function Class
Anks1	ankyrin repeat and SAM domain containing 1	within coordinates
Gm35290	predicted gene, 35290	1402 bp upstream
Rr340975	regulatory region 340975	within coordinates