rs259414306 SNP Detail

Summary

• ID
  rs259414306
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110830233 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAATAGTCA CACCAAATCA AATTATGGGT
  GGCTTCTTAA GATCCTACCA GTCCATCGCT GATCGCAGCA TACCTGCCCC TCCCGCCCTC
  CCTGCGTCTT TTTGAGGTTT TCACGCAGAC AGGCTGTCTC TAGTTCATTA ATGGAATGGT
  R
  CAGATTTCAC TAGTTCAGGC AGCAGGTGGC TTTTCTGCTA CCATAGCTTT CCTTTCAGCT
  TCAGGTTTCT TGGTTTCTGC AGCTTTTCCC CCTAAAGGTT TCTTCCCTTG ACACCCAATT
  CTCCACAGGC TTCTTGCTTG TAGCTCCCTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195316	CHEV_9_110903669	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259414306					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110830233 () rs orientation: forward

Symbol	Name	Function Class
1700061E17Rik	RIKEN cDNA 1700061E17 gene	within coordinates
Gm10030	predicted gene 10030	within coordinates
Rr687273	regulatory region 687273	1404 bp distal
Rr687274	regulatory region 687274	1119 bp distal
Rr687275	regulatory region 687275	974 bp distal
Tssr91675	transcription start site region 91675	726 bp downstream