rs259415483 SNP Detail

Summary

• ID
  rs259415483
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107732251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CGAGAAGTC TCTTTTAATG TCTTACGACT
  TTTTAAAGAT TAtttttgtt ctccgagaat tttagacaat gcattttgac catattcacg
  tcccctcacc cagctcctcc cagattcaca cccctcttcc ctacgcaccc aattttgagt
  Y
  ctctttttta ttttatttta ttttatttta ttttatttta ttttatttta ttttattttt
  taatccttca agtctaattt gggctgttcc tttggggcta tccactggag tgtggccaac
  ctcccagggt ccaaattcct aaaaacaaaa                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320866006	CHEV_3_107627853	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259415483					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107732251 () rs orientation: forward

Symbol	Name	Function Class
Gm36211	predicted gene, 36211	within coordinates
Rr583053	regulatory region 583053	1349 bp distal
Rr583054	regulatory region 583054	602 bp proximal