rs259453447 SNP Detail

Summary

• ID
  rs259453447
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28220578 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTAAGAGA GATGCTGAAG
  ATCCCAGGAG CTGAATGACC TCAGCAGAGA CGAGCACAGG GCTGGGTGGA AGTCTGTGTT
  CTCAGGACCT GTTGGTCACA GCCCAGGTGG CCGTCCGTTC ACTTTCTAGC CATTGACACG
  GGAAGGGGAA AGCCTTGGGA AGGTAGTCCC CAAAAGCTGG GTATGCCTCT TCAGTGCAAT
  Y
  ATGCTGAAGA GGTGGCAAAT TTGAAAAAGA ACAGCCTTAA AGGCTAGGCA TGGGGAGCTA
  GGACAAGATG GTCACAAGTT CCACATCAGC CTGGACCACA GAGTGAAGCT GCCCTAAGCA
  ACAGCCACGC CCTTTATCCT AGGTGGCTAG AAAGTCCAGG TCAGGGGAGC GCAGGAAAGT
  AAGCATGTGA GCCCAGTTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325351149	CHEV_17_28138549	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259453447					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28220578 () rs orientation: forward

Symbol	Name	Function Class
Anks1	ankyrin repeat and SAM domain containing 1	within coordinates
Gm35290	predicted gene, 35290	within coordinates
Rr340975	regulatory region 340975	within coordinates