rs259515093 SNP Detail

Summary

• ID
  rs259515093
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13265532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAGAGTC CCTTCTCATT
  TCAGAGTGAA GGGTCCTCCC CTTTGTACTT TATCATAGGA AGAGACTGAC AGCTGACTGC
  TTTAGAGGGA GGGAGGGGGA GGAGGGAGGG GAGGAGGGAG GGAGAAGGAG GAGGGAGGGG
  AGGAGGGAAG GAGACTTTCA GTGGGCTGTG ACAACTGGTA TTCCCTTCAC TTCTTTTCTG
  Y
  CCTGCCTCCT TGAGTGTCCT GGGCTACTTA GATGTCCGGC CACATTGTAT CACCACTGAA
  GTAGCAAGTC ACCCAAGTGT GGCCTTGACA CATACTAGAA GAACCTGTCC ATCTCTGGCT
  AAGAGTTAAC CTCAACAAAA GGGTTGTTAG ATGATGTTAA ATGTTGCTGA TAAAACTGTT
  GGTGAGGGCT GGTGAGATGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505150	CHEV_8_13215532	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259515093					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13265532 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	1452 bp upstream
Rr368495	regulatory region 368495	1696 bp downstream
Rr368496	regulatory region 368496	1359 bp downstream
Rr659888	regulatory region 659888	1009 bp distal
Rr659889	regulatory region 659889	1408 bp distal
Rr659890	regulatory region 659890	939 bp proximal