rs259578192 SNP Detail

Summary

• ID
  rs259578192
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13263752 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCCCACAGA TGACTATTTT
  CTGCCATCTG CTTCATCTGT GGTGGTTTCA CCTCATCCTG CGGCCTTCTG TTGAACTCTC
  AGAGGCACTG AGGAGCCCTG ACAGAGGGCA GGAAGTGGCT AAACGAGAGT GCTTTTCCAT
  CCTCTCAAGG CAGAACAAAA CCACAATACT CCCCTCTGCT GAAGGGGCCA TTTTGGGGGC
  K
  GGGCCAGGGG CCGGAAGTAT GTTCCTCCTA GAAGACAACA TCAGGCCAGG GCATGGAAGG
  CCCAACCCCT GCCACAACCA TACCAGTAGG CATTGTGCTC AGCAATGTTT TAGTGCTAAA
  TGCAGTGTCC CATTTAGAGT TCTAGGTCTT ACCCCATCTC CCTAGAAACC CAGGCAATGA
  CCTGTGAATT TGTGTGCCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505133	CHEV_8_13213752	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259578192					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13263752 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	within coordinates
Rr368495	regulatory region 368495	within coordinates
Rr368496	regulatory region 368496	220 bp upstream
Rr659886	regulatory region 659886	247 bp distal
Rr659887	regulatory region 659887	289 bp distal
Rr659888	regulatory region 659888	281 bp proximal
Rr659889	regulatory region 659889	331 bp proximal