rs259584488 SNP Detail

Summary

• ID
  rs259584488
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:96515360 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctactgaag AAAATGTctc ttccggcaac
  cgtcaactgt caaaaatcct tgtaaatcct cctgcaccct accacaggat gttggctccc
  agtattgcac ggatcttgta tagtacagac aaccacagct gctgtcaggt agaatggctg
  R
  agagatggct gaagggttta gagcacttag agaagagttc ccagcaccca agtggcaact
  cacaatgctc tgtaactcta gttccagggg atcctactcc ttctgacctt cagggacact
  aagcactcat tatggtatac atacatgcaa                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323111056	CHEV_9_96533726	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259584488					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:96515360 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22167	CpG island 22167	1324 bp distal
Rasa2	RAS p21 protein activator 2	1695 bp upstream
Tssr90976	transcription start site region 90976	1753 bp upstream