rs259629612 SNP Detail

Summary

• ID
  rs259629612
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132184221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTGGGGTT CTTTAAAAAA
  CTTTTTTAGA CAGTTTCTCA CCTGGAACTC TGTAGAGAAG GCTGGCCTCG AACGCACAGA
  AATCTGTCTG CTTGTCTCTT GATGCAAAAC CCCACTCCCA CCTGGGTCTT GCTATATTGT
  CCAAACTGGA TCTTAAGTTT CTGGACACAA GTGTTCCTCA GACTTCAGCT TCTCTGGTTG
  Y
  TGGGACAAAT GAGGACAAAC TATGCCTTGC TTGATAGTCT GTGTGTTTGT GTTTGAGTGG
  GATTAGTCAG GGAACTTGTA CATGAGTGGT ATTAGTTATA GATCTTGTGC ATGCTAGCCA
  AACAGTCTAT ACTGGACTAC AATCCATTCC TCTGAATGAC AAACTAAGAT CCAAAGTGAG
  TTATGGCCAG GCTTGTTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333551	CHEV_4_132012825	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259629612					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132184221 () rs orientation: forward

Symbol	Name	Function Class
Med18	mediator complex subunit 18	1821 bp downstream
Rr377204	regulatory region 377204	637 bp upstream