rs259638203 SNP Detail

Summary

• ID
  rs259638203
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103375801 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCCA AGTTGAGACC CATCCCATAG
  R
  CAAGAACTAA TTCCCCGACA CTATT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320442490	CHEV_2_103385613	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259638203					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103375801 () rs orientation: forward

Symbol	Name	Function Class
Gm13996	predicted gene 13996	1803 bp upstream
Gm75314	predicted gene, 75314	within coordinates
Rr561864	regulatory region 561864	1743 bp proximal
Rr561865	regulatory region 561865	1828 bp proximal
Rr561866	regulatory region 561866	1890 bp proximal
Rr561867	regulatory region 561867	1930 bp proximal