rs259657619 SNP Detail

Summary

• ID
  rs259657619
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:98620041 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctccccttc ccagacactc ctccctataa
  aagatattta atcacaggcc tgccctgaga aaatgggtac aattttactc atcaacttcc
  caccatgaca ataaatgctt taaggctagt gaacAGGGTA AGCAGAAATG GGATAagggg
  R
  ttgggggtgg ggtggggtgg aggggaaata aggaaagggg ataaaaattg aaatgtaaat
  aaagaaaata tctaataaaa taaaaaaata catagattgt ctcttcttat cgggatccac
  catgggaaac aatggagcag gccttcctct                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319867626	CHEV_1_100588893	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259657619					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:98620041 () rs orientation: forward

Symbol	Name	Function Class
Tssr8238	transcription start site region 8238	1160 bp upstream