rs259679024 SNP Detail

Summary

• ID
  rs259679024
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:126388357 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTAAAAGA GGGTCTTTGG
  GGGGAGGGGG AGGACTCTCC AGGATTTCTT GGCATATACC TCTACCAAAC GCTCTCACTT
  CCTGCTGCAC AGCTCCTCTC CAATTTGCTT GGGCGGCCAA ACATCTTGCT TCTGTGTCTA
  GATGGTAGAG CCTGGCGTTA CCTTCTTGAA TGTCAGTGGG AACCTGGAAC TGACAGACAA
  R
  GGTCAGTGGG CTCGAGGAAG GTTCATTCAC TTGTCACCCT ATGTAAAACC CAAAAAGGAG
  TCAAGGCAGC CAGATGGTTC AGAGGCACTC ACCTTGCAAG CCTGACCACC TAAGTCGGAT
  CCCCAGAAAT CATGCTCAAA GTTACTCTAT GGCCTGCAGT GTGCTATGGA ATGCAAGTGC
  CTGTACTCAC ACAACGATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322860915	CHEV_8_128185518	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259679024					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:126388357 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd620e	DNA segment, Chr 8, ERATO Doi 620, expressed	within coordinates
Gm30871	predicted gene, 30871	within coordinates
Rr180111	regulatory region 180111	844 bp proximal
Rr183380	regulatory region 183380	790 bp distal