rs259750449 SNP Detail

Summary

• ID
  rs259750449
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13264937 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAACTAAATA AATAAATAAA
  TAAATAAATA GTAAAAAATA AATAAAAAAT AAAAGCTCTT ATTGTCATCA TAGAGTCAGC
  TAAACCATAG CCACAGCCAC CACTCAGCAG ACTAACACAC AAGCGAGCAG TCCTTGGTGT
  GATCAGTGCT TTCTCATAAT GTTTAGAAAA GTACAAAGAC TTCCATTAAG AACTTTCAAA
  M
  TTAAGGCTGA AGAGATGGCT CAGTGGTTAA GAGCACTGGC TACTCTTCCA AAGGACCCAG
  GGGTTCAATT CCAAGCATCC ACATGGTAGT CTCAACTGTG TGTAATTCCA GTTACGGGGG
  TGGGAGGGCT GACATCCTCA CAGAGACATC CATGCAGGTA GAACACCAAT GTTAATAAAA
  TAAAAGAATA AAAAGGTGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505147	CHEV_8_13214937	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259750449					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13264937 () rs orientation: forward

Symbol	Name	Function Class
Gm63815	predicted gene, 63815	857 bp upstream
Rr368495	regulatory region 368495	1101 bp downstream
Rr368496	regulatory region 368496	764 bp downstream
Rr659886	regulatory region 659886	1432 bp distal
Rr659887	regulatory region 659887	1474 bp distal
Rr659888	regulatory region 659888	414 bp distal
Rr659889	regulatory region 659889	813 bp distal
Rr659890	regulatory region 659890	1534 bp proximal