rs259789738 SNP Detail

Summary

• ID
  rs259789738
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:115572612 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atacacacg gttcaaagat aagtgcagaa
  taaagttcca tgggaaatag aaatgaaaac ccggacgaaa tgtagatatc tattaaacag
  agcgtagcat ttgcctttta aattaaactt gattttctaa ctctgaaatg ggtcatggga
  R
  taccatattg ctgtggtatt tagactatat gttaatatag aaaagcaata tagctacttt
  gttaagtaaa tacttacaac atgaaggaaa tCTATCACCA AAATTACAAT TAAAATATTT
  GACAATTTGT AAGGGGTATT ACAAACATTT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320893283	CHEV_3_115481881	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259789738					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:115572612 () rs orientation: forward

Symbol	Name	Function Class
Rr583598	regulatory region 583598	288 bp proximal