rs259838087 SNP Detail

Summary

• ID
  rs259838087
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:68257405 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTCTGTAGA AGACATACTT
  TTTGTTTGTT TTTTTTTTGT GTTGCTTTGT TTTGTTTTGT TGTGATACAG GATCTGTTAT
  TGACTTTGGA CCATTGTGAT TAGGCTAGTC TAGCTAACCA ATTAATCCCT GGGTCTCCAA
  TGTTGGGAAT ACTATTACAT ATAACCAGGC CTGGCTTTTT CATGTGGATC AGAGGACTGA
  R
  TCCACTCTGG TTTTTCACTG TTGTGTAGCA ATCACTTTAG TAACAGGGTC TTTTCTCTGG
  ACTGATTTAA AATATGTACT CAAATTTCCC ATTGAACCTC ATAAACCCTC CGACATATAT
  GACAATTTTT ATGCCCATTT AAAGGAAAAG AGGCTGATTT TGTTATGTGT CTATGTGTCT
  AATCTCTTAA ACATAAAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321154316	CHEV_4_68000202	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259838087					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:68257405 () rs orientation: forward

Symbol	Name	Function Class
Rr376643	regulatory region 376643	1902 bp upstream