rs259845142 SNP Detail

Summary

• ID
  rs259845142
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:141429562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAAATTTTA TGATTTAAGA
  ATAAATTCTA CTCTACTGTG ACAAGATAAT TGGCCCCTTC CATCATCATT GGAGGACAGG
  TATGTTTTTT TCCTTTTAAA AATGTATTAA TGTCTAATGT GCCCGTGAAA TTCTTTTATT
  TGATAAGGAA GCACTTTGAA AATACAGTGA AACAATTTAT TTTTAATCAA AAGTCTATTC
  Y
  GTGCCTCTGA CCATCACACT TGTAAAAGGA ATTGAGAAAT CATTTGAAAG TTAAAAACTG
  TGAAGCAAAT AGAGCCACTG TGTTTGTTTA ATGTCAGAAC AGACATCCAT CAAAAGTGTT
  GAAGATGGCC TGCAACACAT CACTGCAACA CAAATGTCTC CAAAGTGCAG GGTTTACATA
  AATCTAGAGC CCTTTGGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320994742	CHEV_3_141386765	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259845142					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:141429562 () rs orientation: forward

Symbol	Name	Function Class
Rr74631	regulatory region 74631	1735 bp proximal
Unc5c	unc-5 netrin receptor C	within coordinates