rs259850427 SNP Detail

Summary

• ID
  rs259850427
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:69664773 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atataccaa atattcatac acataaaatg
  aaaatTTAAG TCCAGCTTAt ttattagtat ctactgtaag tgtatgggag ttttgcctgc
  acgtatgtct gcataccatt tgcacacaga gtgccctcag aggccataag agggtatcag
  R
  tcccttggaa ccagttatgc acagtagaga ggtccctccc acgtgagtac tgggaaccaa
  ccccaagtcc tctgaaagca cacgcagtgc tcttaattgc tgagggtctt tccagcccAC
  CCTACCCTCC CTGTTTCTTT TCTGTGAACA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324404684	CHEV_13_69655532	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259850427					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:69664773 () rs orientation: forward

Symbol	Name	Function Class
Rr273498	regulatory region 273498	within coordinates
Rr277031	regulatory region 277031	1573 bp distal
Tent4a	terminal nucleotidyltransferase 4A	within coordinates