rs259864480 SNP Detail

Summary

• ID
  rs259864480
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:144555150 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gacttctgt cattcagagt tcccattgag
  aaataagctg ttatactgat gggtattcct ttatatgtag ctttatattt tttctcttgc
  agtttccttc cttccttcct ccctccctcc ctctctctct tttcctccct tcccttccct
  Y
  ccctcccctc ccctcccctc ccctcccctc ccctcccctc ccctcccctt tctttttttg
  agacaggggt tctctgcata gcccttgctg tcctggaact cactctgtag accaggctgg
  cctcgaactc agaaattcgc ctgcctctgc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320537062	CHEV_2_144538966	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259864480					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144555150 () rs orientation: forward

Symbol	Name	Function Class
Dtd1	D-tyrosyl-tRNA deacylase 1	within coordinates
Rr374001	regulatory region 374001	1521 bp upstream
Tssr20549	transcription start site region 20549	1553 bp upstream
Tssr20550	transcription start site region 20550	1615 bp upstream
Tssr26613	transcription start site region 26613	1328 bp downstream