rs259874969 SNP Detail

Summary

• ID
  rs259874969
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132184555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACTACAAT CCATTCCTCT
  GAATGACAAA CTAAGATCCA AAGTGAGTTA TGGCCAGGCT TGTTGGGCAC AGGCATTTAA
  CCCCAGCACT CAGGAGGCAA GAGGCAGGCT GGAGCTATGT GAATTCAAGG CCAGCCTGGT
  ATACAAAAAG TTCTGGAACT TACTCTGTAG ACCAGGCTGG CCCCAAACTT AGTGATCTGT
  M
  TTTCTCTGCC TCCTGAGTGC TGGGCCACCA TGCCTGGCTG AGAAAAAAAT AAATTTTTTT
  AAGTTCCAAA ACCTAGCAAC CACAGTGTAC AGGCAGTGGT TTGTAGACCT CCACAGCTAC
  ACATGCAGGT GTAGCAAAAA TAGAACCATC TCTGGTATTT TATTGGTTTT AAAATGTTCC
  ATCAACAAAA ATGTCCTTTT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333557	CHEV_4_132013159	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259874969					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132184555 () rs orientation: forward

Symbol	Name	Function Class
Med18	mediator complex subunit 18	1487 bp downstream
Rr377204	regulatory region 377204	303 bp upstream
Rr600976	regulatory region 600976	1705 bp distal