rs259936703 SNP Detail

Summary

• ID
  rs259936703
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:145656637 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGAAGGCA GGAAACAGCA
  AAAGTCACCA TCCTGTCAGA GATAAAACCC GCACGAGTCT TCCTCCTGAC CCCTCCCCCA
  ACCCCCATGA TGCTTTCTTC TTCACCCGCC CCTTGCCTTA TCTTTGAAAC ATTTTCTTAT
  GAATGAAATT CTCCCAGTTA CTGAAGTCGC GATAAAAGCC CCTCCTTAAT TGCCCCGACC
  A
  GAATGGAAAC AGCAGTGTGT TTGTAATGGC TTCCCTGCCA TTACAGTGTT ATCATGTTGG
  TTTACAGGAC AGCAGTGTAT ACTTAAAAAT CACAATTATT ACAATATAAA AGTAGGTGAA
  ATAGGTTTAA ATTTGCTCTT TTATTAATAC AGGGACTCAA TGTGTAGCTC ATCACGGCCT
  CAAACTTCCT TTGTAGCACA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321009189	CHEV_3_145613846	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs259936703					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145656637 () rs orientation: forward

Symbol	Name	Function Class
Rr586881	regulatory region 586881	within coordinates
Rr586882	regulatory region 586882	398 bp proximal
Rr586883	regulatory region 586883	1780 bp proximal