rs260044063 SNP Detail

Summary

• ID
  rs260044063
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:84353487 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTTAACCA CACCACTGTT
  TTCTAGTCCT AGACAAAGGA ACATTGTAAC CAAGATGGAC TGTTTTACTG TGCAAGCAGA
  ACATAAGGCA GAAGCTTATT AAAACTGCTG AAAATGTTTT CATAACTTCA AACAGACAGC
  TGTAATTATC TTCCCACCAA AGTCCCTGCC AAACACCATT TTTTTTCTGT CTCTACAAAC
  R
  TGTTTACTCT AGAGGCCTTT CAGAAGCAGC ATCAGACAAT ACTGGATATT CTGCATCCTC
  TCTCCCTCCC TTCCTCCCTC CCTCCCTCCC TCCCTCCCTC TCTAAATTGC TCTCTTAAGT
  GTTCTCTTTT TAATTTCTGA TCTCCTGAGA GTTGGGCATA TCCTATCTCT GACTCATTCA
  GTCAAACCCT TCTCTGATTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325260787	CHEV_16_84556844	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260044063					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:84353487 () rs orientation: forward

Symbol	Name	Function Class
Gm32073	predicted gene, 32073	1683 bp upstream
Rr518505	regulatory region 518505	1654 bp proximal
Rr518506	regulatory region 518506	1755 bp proximal
Tssr139145	transcription start site region 139145	550 bp upstream