rs260054726 SNP Detail

Summary

• ID
  rs260054726
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13304228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACCA CGTGGGAGCT GTTTGGGACA
  Y
  GCTGGCTCTC CAGCAAAGGA GTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505545	CHEV_8_13254228	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260054726					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13304228 () rs orientation: forward

Symbol	Name	Function Class
Adprhl1	ADP-ribosylhydrolase like 1	66 bp upstream
Dcun1d2	defective in cullin neddylation 1 domain containing 2	1735 bp downstream
Rr175514	regulatory region 175514	within coordinates
Rr186316	regulatory region 186316	27 bp distal
Tssr80430	transcription start site region 80430	185 bp upstream
Tssr80431	transcription start site region 80431	143 bp upstream
Tssr80432	transcription start site region 80432	109 bp upstream
Tssr80433	transcription start site region 80433	78 bp upstream
Tssr80434	transcription start site region 80434	60 bp upstream
Tssr80435	transcription start site region 80435	40 bp upstream
Tssr80436	transcription start site region 80436	18 bp downstream