rs260092723 SNP Detail

Summary

• ID
  rs260092723
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124746446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCT TCCTGGTCTT TGCCCTTCTA
  Y
  TCCCAGAGCC TGGAACACCA TCCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855960	CHEV_8_126543607	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260092723					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124746446 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21265	CpG island 21265	760 bp proximal
Taf5l	TATA-box binding protein associated factor 5 like	within coordinates
Tssr80012	transcription start site region 80012	1448 bp upstream
Tssr80013	transcription start site region 80013	1745 bp upstream
Tssr80014	transcription start site region 80014	1812 bp upstream
Tssr80015	transcription start site region 80015	1861 bp upstream
Tssr83422	transcription start site region 83422	1227 bp downstream
Tssr83423	transcription start site region 83423	1336 bp downstream
Tssr83424	transcription start site region 83424	1652 bp downstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	1801 bp upstream