rs260133650 SNP Detail

Summary

• ID
  rs260133650
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:73965942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGCACAG CGGCAAAGGA TGGTGATGAG
  AGTAGGGGTC CTATGGTGGA GCTCTAGAGC TTCCGGAAGG AGCAGCCCGG TACAGAGACA
  GAATGAGGAA GAAGCCAGGG AATGAGAGAA CCTGACTCCT ACCACCTCTC CATCCCTGGC
  R
  CAGGTGGCCT CCACCTTGTG GGGAGGAAGG AAGGCGGACT GAACGTGTAG GAGTGTGTCT
  CCGTGGAGGG TTCAGAACTG GGGTCCAACG AGAATGTCTC TGTTCATCTC TTGGCAGCCT
  GGACAGGGCT CAGGGCTCGA CCAATATGGG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319792979	CHEV_1_73973357	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260133650					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:73965942 () rs orientation: forward

Symbol	Name	Function Class
Tns1	tensin 1	within coordinates
Tssr117	transcription start site region 117	1712 bp downstream
Tssr12216	transcription start site region 12216	1721 bp downstream