AAATAACATA CATCTCAGTC CAGAATGTAT GTTATTTCTA ATGTTCTACT AGCTACCCAT GACTGTGGAA ACAATATAGA TCAATACAAC TTTAGAATGA CCTCAGACCT TTCCTCTACA TCTTTGTTTA TGATGAGAGT ATTTGAAAAT GTGTATTGTT AATAAGTCAT ATAATGAAAT AACGAAGACA GTGTGTCTGA Y TATTGGAATC TCTGAGAACT CTTGGTGAGG CTGGTCTAAT TAGTTCTAAA CTAGGTAGGG CTACGTAGTT GAGACCCTAA ATGAAAAATA ATTAAAAATT AAAAGGTGGA ACAGTGGTCA CCTGATGTTA GATGACTGGA GTTTGTCTTC TAAGCCACCA GAAAGTCTTA CAAGAAAAGT AAGAATAGAA CTGAGCAAAA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss324291300 | CHEV_13_23833658 | CHEVERUD | SCREENING_POP | f | SNP | T | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs260191924 | SNP | T | C |
Location: Chr13:23925772 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi5372 | CpG island 5372 | 1727 bp distal | ||||||
Gm60901 | predicted gene, 60901 | 512 bp upstream | ||||||
Rr369656 | regulatory region 369656 | 1251 bp downstream | ||||||
Rr388130 | regulatory region 388130 | within coordinates | ||||||
Rr475932 | regulatory region 475932 | 22 bp proximal | ||||||
Rr475933 | regulatory region 475933 | 523 bp proximal | ||||||
Rr475934 | regulatory region 475934 | 1350 bp proximal | ||||||
Tssr118856 | transcription start site region 118856 | 1854 bp downstream | ||||||
Tssr118857 | transcription start site region 118857 | 1614 bp downstream | ||||||
Tssr118858 | transcription start site region 118858 | 512 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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