rs260285989 SNP Detail

Summary

• ID
  rs260285989
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:95941789 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ggacccatg ttaacaagcc aggcattgct
  gtatgcacta gtaatcccac tgctagggag gctgagaaaa tccctggagt tcatttgcta
  gcaatctagc ctacttggca agctccaggc cagataactg cattaataat aataataata
  W
  taataataat aataataata ttggtaataa taataaagtt ggacagcacc ttaagactga
  tacctaaggt ttttcttgga ctccacatgc aagcacacac aTGTGCACAC ATAACTGCCC
  ACAAAAATAA GTCCACAGAA GAGACCAAAT                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324490132	CHEV_13_96575236	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260285989					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:95941789 () rs orientation: forward

Symbol	Name	Function Class
Iqgap2	IQ motif containing GTPase activating protein 2	within coordinates
Rr277718	regulatory region 277718	189 bp distal
Rr285448	regulatory region 285448	212 bp proximal