rs260307728 SNP Detail

Summary

• ID
  rs260307728
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:112294367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCACAACAGC TGCTTTATTG
  AGATTCATCA GTCACAAGGC TTAATTAAAA CAATACCTTG CATCTAACTC AGCGTGGATC
  ACCAAAGCAA ATGTTTGTTT TGCTGCGTCA ATTAAGCCTT CCCGTGGAAC CAGCGGCATC
  AGGCAGTGAA GCCACATCTG AGTCTGACTT GGCCCCTCTC TGGAATGCAG GGATGAGGGG
  M
  TACCCAGGGG GCATCTCCAA CTGCTCAAGG GCAGGAGGGA TGGGAAGAGG ATGGGCAGGG
  CTTTTGGGTA TCCCCCTCCT CCTGGTCACT GTCTAAGATT CTCAACACAG CCCTTTGGGT
  ACAGGTGTCT TCTGTGTTCT CAAGCAGAGA CACTGTTTTT TCAAGGGACT GCTAGATAGA
  TGTCTCTAAG ACAAAATCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324166886	CHEV_12_113566144	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260307728					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:112294367 () rs orientation: forward

Symbol	Name	Function Class
Gm60261	predicted gene, 60261	1251 bp upstream
Rr473423	regulatory region 473423	1040 bp proximal
Rr473424	regulatory region 473424	1262 bp proximal