rs260307990 SNP Detail

Summary

• ID
  rs260307990
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156190053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCACTTCCC ACCTTTGGAG CCCTCTTCAA
  CTCCCGGATC AATTCACTCA GGCGACGCCG GAAGGACCCC TGTttttgtt ttttcaagac
  agggtttctc tgtgtagccc tggttgtcct agaactcact ctgtagacct gtatgtatgt
  R
  tgtatgtatg tatatatata tatatatata tatatattgc aaattctcag acccaagagc
  tattaaatcc aaaagtccag gagggagggc ttgttaacaa agctccaaga attctgaagc
  acactagagt AGTTTTGTTT TGTTttttgt                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320578828	CHEV_2_156173869	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260307990					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156190053 () rs orientation: forward

Symbol	Name	Function Class
Cnbd2	cyclic nucleotide binding domain containing 2	within coordinates
Gm14253	predicted gene 14253	293 bp upstream
Tssr27051	transcription start site region 27051	133 bp upstream
Tssr27052	transcription start site region 27052	79 bp upstream