rs260337758 SNP Detail

Summary

• ID
  rs260337758
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:156081680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCCCTCCC TTCCTCCCTC
  CCTCCCTCCC TTCCTTCCTT TCTTTTTCTC TGTGGTAAGA TCTTACTGTG TAGCCCTGGC
  TGGCCTTGGA CTCACAACTG GTCCATCTGC TGCTGCTTGT CTGCTTGCTT GCTTGCTAGC
  CTGCTTTGTG GATTTTTAGA GACATGATCT CTCTATTAAA TAGCCCTGGC TATCCTAGAT
  Y
  TTAATATGTA GACCAGCAGG CCTCTCTCTC TCAAATCCAG GGACGGATAA TGTCCACCGT
  CACACCTGGC TCTATCTCTG CTTTCTCAAT GCTAGGATAA TGGTTTCTGC AACCATGTCT
  ACCTTTTTTT TTTGTCTTAT TAGGTTTTAC ATTTAATTAT TTTTTGAAAT GCAAGGACAA
  TTTTATTAGA GTTTGGAAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321444437	CHEV_4_155371332	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260337758					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:156081680 () rs orientation: forward

Symbol	Name	Function Class
Sdf4	stromal cell derived factor 4	within coordinates
Tssr40753	transcription start site region 40753	867 bp downstream