rs260359677 SNP Detail

Summary

• ID
  rs260359677
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9931223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCTGCCAGT TTCCGGCTGT
  GGGGCCTGGC AGCCTCTGGG CCAGGTACTC CCATCGTCCT CAGCGTGTGT ATGCACTCTG
  ACCAAATATG GAATCAAAGG CAAGACACGC ATGTGAAATA TAAGAGTTAA GTGCAGAGTT
  CAGTTTTCAA ATCTAGCACA GATCTTATCA CATTGTTATT AAAGATGCAC TCAGTGCTAT
  M
  GAATTATTTA ATGTAGACCC AGTAAAATGT TCATGTATAT TTTTATTGTA GAAGATGGTC
  ATTTGTCCAT AACTGAGTGC CACAAAAATA AACTAAGCAC CAGTTATATG CCAAATAATC
  AGCTTGGAAA CAGATGAATC AAGATGGTGA TGCTTTGAGA TAGGTCTTTT CAGCAAGAGG
  TGAAGGGACA GCTGACACAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320652253	CHEV_3_9866163	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260359677					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9931223 () rs orientation: forward

Symbol	Name	Function Class
Gm56771	predicted gene, 56771	within coordinates
Rr367411	regulatory region 367411	71 bp downstream
Rr573525	regulatory region 573525	within coordinates