rs260389253 SNP Detail

Summary

• ID
  rs260389253
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:17768580 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTCTATTC CTTGAGGACA
  AGTTATTTCT TTTTGTCCTC AAGCCTCCAT CATATTCATT TTTCTCATAG TGGTGAAGTC
  CCTTACTCGC TGATTAAGCA GCAGGAAATA GAACACTTTC ACAATCCACT TCCCCTCACC
  TGGTCTACTT CATTCAGCTT TTCAGTCATA GTGTTTCATC TCAATAATAG AAACCATAAC
  K
  AAGACACCAA CAATGGACAT ATTTGTACTT TCAGTATCAG TCAAAATTCT TCTTGTATTT
  TAGTTCTTAT CTTTATGCCT TTCTTCCTCT CACACTGAAC TTCATCTACA GTTCTTATCA
  CAACCCCAAA AGAAGAGAAC CGCACAAACA TAACTCCAAC TGTCACAACA AAAATAAGAG
  AAAGCAACAA CCTTTGATCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320673569	CHEV_3_17614416	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260389253					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:17768580 () rs orientation: forward

Symbol	Name	Function Class
Gm56811	predicted gene, 56811	within coordinates
Tssr32670	transcription start site region 32670	232 bp downstream