rs260394831 SNP Detail

Summary

• ID
  rs260394831
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:21786326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGTGCTAC TTAGATCAAT TCTGTGATGA GCAGGAAAGG
  TAACAATGTG TCTGAAATAT AAGGTGGACT TCTTAACTCA AATCAAAGTC TACAGATGTA
  W
  TCAAGAGGTC ATTAAACAAT TACATAAGTA TGTATATATA TATATATATA TATATATACA
  TACATACACA CACGCGCACA TATATATGGG TGTGTGTGT                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322526083	CHEV_8_22435989	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260394831					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:21786326 () rs orientation: forward

Symbol	Name	Function Class
Defa5	defensin, alpha, 5	1129 bp upstream
Gm65300	predicted gene, 65300	within coordinates