rs260413875 SNP Detail

Summary

• ID
  rs260413875
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:24174819 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTCTCTC TACTTGGAAG
  AGGATGGGTT ACTAGGAATG GCAATGGAAG CATGGCATCA GTGCGGGAGA GCAGGCTGCC
  CGCAGAGAAG GACGCTGCTG TCCTCATGGA GAGCATCTCT CGGCCATTCT TCTTTCCTTC
  TGGTCTGTCT GCTGTGGTTG GATCTTGAAA GTTTCAGAGG CATTACCTGG AGGTAGTGGA
  R
  CCTTGATGGG GTGTGGTCTA CTGGAAGCAA GTCTGGTCAC TGAGCATGCT CTTGAAGGAG
  TTATTTGGAT CCCAGCCCCT TCCTTGTCCT GATTTTGCTC ACCATGAGGT GAACAGGTTT
  CCTCTCCCAT ATGCTCCTCC CTGTGTTATA CAGTGCTCCT TCCCATTCTG TGCAGTGCTC
  CCCCATGCTG TGCAGTGCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323597985	CHEV_11_24124819	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260413875					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:24174819 () rs orientation: forward

Symbol	Name	Function Class
D11Mit152	DNA segment, Chr 11, Massachusetts Institute of Technology 152	1454 bp proximal
Gm33440	predicted gene, 33440	within coordinates
Rr385801	regulatory region 385801	within coordinates