rs260460158 SNP Detail

Summary

• ID
  rs260460158
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21577067 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACAACCA ATGAATATAT
  TTTAAAATCA AAAAGGAAAA AGGGAAAATT TCTTTCATTT TCAATCAGCT CAGGTTCTTA
  TTCATTGCTG CGTCAGGTTT TATGTGAGGT AAGTGATTAT CTTAAAGCTA CCCCAAGTAG
  ACATTTTACT CATATTAGCC TCTCATCGGT TGAATTTTAC TAAATTTTTA TATGACCCCC
  M
  CCACCACCAA CAAGACTTGA TTGATCATTG TGGATTTTAT CTGCATAAAT TTGTGGGGAG
  CCGCCCTCAC ATTCGCCGTT GCAAGATGGC GCTGACATCC TGTGTTCTAA GTGGTAAACA
  AATAATCTGC GCATGTGCCA AGGGTAGTTC TCCACTCCAT GTGCTCTGCC TTCCCCGTGA
  GGACAACTCG GCCGATGGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320683219	CHEV_3_21421825	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260460158					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21577067 () rs orientation: forward

Symbol	Name	Function Class
Gm65698	predicted gene, 65698	within coordinates
Rr574129	regulatory region 574129	1422 bp proximal