rs260461526 SNP Detail

Summary

• ID
  rs260461526
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44777432 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGAGAGCA ATAAACAAAC
  AAAATAGATG AAGAATGGAA AACTTAGCAT TAAAAAATAA ATTGAGTGAT TGAACTTTAC
  TGGATGCTCC TCTAGGCAAG CATGAGTTCA TTTTTTCATT GTTTTCCAGG CAGGGGGAAG
  TAGGTTGTCG CACTATGAAG TGCCACACTA TGCATCCCAA TCCTGCCCCT GCCTCCAGAG
  Y
  GCTGGGACGG TTGCAGATGC TCAACCTACA GCTGCAATCT CCTTCCGAGA ATCATCTGCC
  TTCTCAAGAA AGAGACCTAT GGATGGGGCT GGAGATGAGG CTCAGTGGTA GAACACTTGC
  CTAGATATGC AAGTTCCATC CAGACCTACA AAGTAATAAT GAATAGCAAT AGGAAGAGGA
  GGGAGAAGGA GGGGGAGGAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330192	CHEV_13_44719325	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260461526					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44777432 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	within coordinates
Rr283673	regulatory region 283673	within coordinates