rs260486884 SNP Detail

Summary

• ID
  rs260486884
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:4003966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCTGA ACTCTCAAAG GAGCCCTGGA
  R
  TCCCCCAAAC AAAACAAAGC AAATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323873010	CHEV_12_3953966	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260486884					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:4003966 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4369	CpG island 4369	676 bp proximal
Pomc	pro-opiomelanocortin-alpha	985 bp upstream
Rr366691	regulatory region 366691	481 bp upstream
Rr462232	regulatory region 462232	1400 bp proximal
Tssr112541	transcription start site region 112541	977 bp upstream