rs260510838 SNP Detail

Summary

• ID
  rs260510838
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:52739613 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ctagctgca tatgtatcaa aagatggcct
  agtaagccat cactggaaag agaggcccat tggacatgca aactttatat gccccagtac
  aggggaaagc cagggccaaa aagtgggaat ggatgggtag gggagtgggg agggaggata
  Y
  gggggacttt tgggatagca ttggaaatgt aattgaggaa aatacgtaat aTATATATAC
  ACACATACCA ATGTAAACAG CTCATAGAAG TGTTTGGCTG ACTGACCAGT TTCAAGAATT
  AGACGGTGAC TGTACGTTTG TCCTCTGCAA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319721160	CHEV_1_52757298	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260510838					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:52739613 () rs orientation: forward

Symbol	Name	Function Class
Gm29670	predicted gene 29670	1818 bp downstream
Mfsd6	major facilitator superfamily domain containing 6	within coordinates