rs260532418 SNP Detail

Summary

• ID
  rs260532418
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:13335368 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTACTCCCG CCATAAAGAA
  AGTGCCTGGC GAAGCAGCTC AGTGTGCTCA CTGCATGAGC TGGACAGCTG AGTTCCACCC
  TCAGAGCCTA CACAAGAGGG AAAGGGGAGG GGAGGGGAGG GGAGGGGAGG GGAGGGGAGG
  GGGGAGAGGA GGGAAGAACT GACTCCACAT GTCCACCTCA GAATAAAAGA AATGATAAGA
  Y
  TTATTTCTAT TTTATGTGTA TTTTATGTCT GCATGTCTAG TGCCCATGGG AGCCAGAAGA
  GGGTGACGGA TCCCTGACAT CAAGGACATC AGTGAGCTGC TGTGTGGGTG CTGGAACCCA
  ACCCTGAGTC TCCCTGAAAG TTCTCTTAAC TGCTGAGCCA TTTCTGTGGC TCCAGTAATA
  AAGGTTTTTA AAAACAATAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322505808	CHEV_8_13285368	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260532418					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:13335368 () rs orientation: forward

Symbol	Name	Function Class
9530085L11Rik	RIKEN cDNA 9530085L11 gene	within coordinates
Cpgi20111	CpG island 20111	1710 bp proximal
Dcun1d2	defective in cullin neddylation 1 domain containing 2	within coordinates
Rr659902	regulatory region 659902	1951 bp distal
Rr659903	regulatory region 659903	1512 bp proximal