rs260591359 SNP Detail

Summary

• ID
  rs260591359
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101198002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCG GGGCACTGAG CTTCTTGGGG
  Y
  TAGTCCACTC TTCATTGTAG TAAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851729	CHEV_3_101094609	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260591359					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101198002 () rs orientation: forward

Symbol	Name	Function Class
Gm32803	predicted gene, 32803	within coordinates
Rr581993	regulatory region 581993	889 bp distal
Rr581994	regulatory region 581994	360 bp distal
Rr581995	regulatory region 581995	116 bp proximal
Rr581996	regulatory region 581996	422 bp proximal
Rr581997	regulatory region 581997	1859 bp proximal
Tssr34785	transcription start site region 34785	53 bp downstream