rs260627146 SNP Detail

Summary

• ID
  rs260627146
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131711693 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAGAAGCT GTCTCAACCC
  CTACCCTCAT CCCCAGACTT TTTTTTTTTT TTAAGGACAA CATTTAATTG GGACTGGCTT
  ACAGGTTCAG AGGTTCAGTT CATTATCATC AAGGTGGGAA CATGGTAACA TCTAGGTAGT
  CATGGTGCAG GAGGAGCTAA GAGTCCTACA TCTTTATCTG AAGGTTGCTA GCAGAAAACT
  Y
  TACCATTTTT CCCCCTATAC TCATTTTTCA ACTTTAAGGG ACGTCAATTT GAATATACAT
  GTTCATACTG CATATCTAGG TAAGTGTATT ATTACCTTCA ACACTGTGGT ATGAGGAGAA
  TGTCAAGGGA GGGGTTTAAA ACTTCATTCT TGAAACTATT GATTCTTGAA GTCTGGCTGA
  TGCTTTTTTT ATGTTACTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329632	CHEV_4_131540297	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260627146					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131711693 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Tssr43622	transcription start site region 43622	1652 bp upstream