rs260638628 SNP Detail

Summary

• ID
  rs260638628
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:5272786 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCCAGCCTG TGAGGACAGT
  GGTGCCAGGC TGCCCTAGCT CGGCCCACTC TCAGTGCAGA CCCTATGACA CAATGGTTAC
  GTAACCAGTC CTTTACACGG CTCGACTCAG TGGATGCCAG CAGCTGTAGG TTTTTTTTTC
  TTTCTTCCTT CTCCCATTAT TTGCATCTCA ACTTACCCTG TCTGACCCAA ACTACTCTAG
  A
  GGTAACTATT GGGACCCCCA GTCATATCTG GTGCTGGTGT TAATAATAGC TGTCTCAGAA
  AGCCCACATT CACTGAAATG AAAGTAGCCG CTGCTGGCAT TGAACTGTGG GCTCAACATT
  GCATCAGCTC CTTTCTCAGA GGGCCAAACC TAAAAGCGGG GTGCTTCTGT TAAGTTGCGG
  CATGGACAGA CTTATATACT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323876336	CHEV_12_5229592	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260638628					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:5272786 () rs orientation: forward

Symbol	Name	Function Class
Klhl29	kelch-like 29	within coordinates
Rr263718	regulatory region 263718	837 bp proximal
Rr267587	regulatory region 267587	787 bp distal