rs260644949 SNP Detail

Summary

• ID
  rs260644949
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:149508640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAAAGGGAG GCGGGGAGAC
  AAGACAGATT CTGAGAGGGG CTGGTAGAGA AGCACTGCTG CCAAGAGCAC TTTGAGTCAT
  CTGTCTCATT CTGCGCTCCC TGTAAAGGAG CTTGGCTGCA GGAGCTACGG CTTTTGCATA
  TCAATGTAGG CCTGGAAATG TGAGGCAGAA ATGAGTTGAA GAAACAGAGT GCAAAACACA
  A
  AGAGGGAAAG ATCAACTGTG ATCCTGAGAA AATCCTTACC TTACACCAAA TTTGATAGGG
  TGTCTTCATT GAAGGAAACA CAGAAACCAA GGAAGGCAGT ATCTGTGCTC AGTTTCTGGG
  GCTGCTGCTG ACTTAAGAGT ATATGTGCCC ATCAGATATG ATGCCAGCAT GGGACTTAGG
  CGAGACAGGA GATCACCCAC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320560194	CHEV_2_149492456	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260644949					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:149508640 () rs orientation: forward

Symbol	Name	Function Class
Gm53264	predicted gene, 53264	within coordinates
Rr566994	regulatory region 566994	within coordinates