rs260649756 SNP Detail

Summary

• ID
  rs260649756
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110848466 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TCACCCAGC ACAGATAAAG GGCCCCGGGG
  AGAGGGCAGA AGCCAGGCTT GTCCTCTAGG TCTCCCAAGA CCACAGACAT GAGGCTGCTC
  ATCCCTTCCT TGATATTTCT TGAGGCCCTT GGTAAGTGCA GGTGCCCAGA GGTAGGGAGG
  K
  GCGGGAGGTC ACCTGCTGGG AAGCTGGGCA CTAAATGCAC TCTTCTGTTA TCTAGGGAAG
  ACTGTTGGGC TCAGAGAGGG TGAGATGTTC CTGTGAGTCC CAGTTCACTG CCTCCCAAGA
  AGGCTTCTTT GTACCAACAT TGGGGACCCT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195419	CHEV_9_110921902	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260649756					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110848466 () rs orientation: forward

Symbol	Name	Function Class
Ltf	lactotransferrin	within coordinates
Rr687278	regulatory region 687278	96 bp distal
Tssr87456	transcription start site region 87456	100 bp downstream
Tssr87457	transcription start site region 87457	1545 bp upstream