rs260653781 SNP Detail

Summary

• ID
  rs260653781
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:44777040 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAGGAGTG AGTGATACCC
  AAATACATGA AAAAGCAACT GTTTCCACGC CCAACAACAC GACTGACACA GCAAAAGCAG
  GCCATGACAC AGGTCGGCCA CAAACTCCAA CACTTCCGAG ACCATCCAGT GAGTGTGGGA
  GGTGTCTGTG ATGGACTCAC ACATGTTCCA GCTTCCAGTC AGGACATCTG ACCTAGAGTG
  Y
  GGGAGGCCAG TAAGATGGCT CAGCTCTTAC AGACACTTGC CACCAAGTCT GAGGATCTAA
  ATTCAATCCC TAGGCCTGAC ACAGTGAACA AAAGCAACTG ACTTCCTCAA GTCATCCTGT
  GACTCCACGC AAGCACTGTG ACACACATAC ACACACACAT ACACACACAC ACACACACAC
  ACACACACAC ACACGAGAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324330189	CHEV_13_44718933	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260653781					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:44777040 () rs orientation: forward

Symbol	Name	Function Class
Gm40931	predicted gene, 40931	within coordinates
Gm47805	predicted gene, 47805	within coordinates
Rr283673	regulatory region 283673	within coordinates