rs260665097 SNP Detail

Summary

• ID
  rs260665097
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:119981534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCC ACTGACAGCC TCTGTAGCTA
  G
  TCCCTCTGCA ACTAGGAATT GCTGG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319931525	CHEV_1_121950381	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260665097					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:119981534 () rs orientation: forward

Symbol	Name	Function Class
Gm41936	predicted gene, 41936	1067 bp upstream
Rr30107	regulatory region 30107	1068 bp proximal
Rr371936	regulatory region 371936	within coordinates
Sctr	secretin receptor	within coordinates
Tssr8396	transcription start site region 8396	1429 bp upstream
Tssr8397	transcription start site region 8397	1445 bp upstream