rs260677297 SNP Detail

Summary

• ID
  rs260677297
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34520202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAGCGACAG ACAAAAAGAA GAGAGAGAGG CCAGTAAGGG
  GACCAAGAGC AAGCCAAGAG CTGAGCAGAG GGCTAAGAGA GAGAGAACCA AGACAGCAAG
  G
  CAGTGCATGG CCTTTCTTTC TTTCCTTCTT TCTTCTTTCT TTTTCTTTCT TTCTTTCTTC
  CTTCTTCTTT CTCTTTCTTT CCTTCTTTCT TTTTTCCTA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322574627	CHEV_8_35116102	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260677297					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34520202 () rs orientation: forward

Symbol	Name	Function Class
Gm9951	predicted gene 9951	within coordinates
Gm40486	predicted gene, 40486	within coordinates
Gm40487	predicted gene, 40487	within coordinates
Rr661931	regulatory region 661931	1055 bp proximal
Rr661932	regulatory region 661932	1559 bp proximal
Tssr76858	transcription start site region 76858	1586 bp upstream