rs260677498 SNP Detail

Summary

• ID
  rs260677498
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:110836711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGATCTGCAG GGATGCCATG
  GAGGACGGCA GAGAGGACTG AGGCCTTCAG CTCCCCTGAA GCAACATTTA CTTGACATTG
  TAAACCGAGG GATGCACACT GGGGATGGGA CTCTGACCCT CTGTGAGAAC AGCCCAGGAA
  CTGTGTGTTG CATTGCGGAA ACCCTCTGAA GGGTCAGCAC TGTCGAAACA AAACAAAGTC
  R
  AAATGAAGAC CCCAGGCACC CAGTTTAATG CAAGCTGGAG TTCAGATGTT GTCTCAGATA
  TGATTCTTAT TCAGCCAGTC AGTATGTGTT TCCTGAAATC TCACTGGTGT CACAGAGAGA
  CAGCAGAGTG ATATGCGTTG GCGGCCGGAT GACTTGAAAT GGCACTGCAA ACACAAGATG
  ATTTTACTTA CGAAATATGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323195370	CHEV_9_110910147	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260677498					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:110836711 () rs orientation: forward

Symbol	Name	Function Class
1700061E17Rik	RIKEN cDNA 1700061E17 gene	within coordinates
Gm10030	predicted gene 10030	within coordinates
Tssr87455	transcription start site region 87455	1478 bp upstream