rs260695834 SNP Detail

Summary

• ID
  rs260695834
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:152681499 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgtccattt ctagtgcttt aaagcttatt
  ataaatatag ggtttgtgtc ttttatctgg gaactaaatg atccaaggtg gggtagagac
  ccgtaattaa tatttaccac aataCCTGCC AGTCCCACAA GGAGTCTGGA AAGAGCTTCA
  M
  AAATGCGGTA TGACCCATTT GGGGTGGGCT TTAGAAACAG TCCAAAAACT GCAGAGAGAA
  GAGAATTAGC CAGGGATGGC CAGAAGACTA TGTTAACTGA TGGTATTTCA GCCTATATGG
  TGACAGGGAC TAGAGAAAGT GGACAGAACT                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320068333	CHEV_1_154652878	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs260695834					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152681499 () rs orientation: forward

Symbol	Name	Function Class
Ncf2	neutrophil cytosolic factor 2	Intron
Rr420547	regulatory region 420547	1775 bp proximal